Actually, though I generally agree with Richard as you already understand, I'll say this a different way in hopes you'll understand my true sentiment.
Regardless of the fact that the MSRT was working in the past and isn't working properly now, the core issue you should and I believe actually are concerned about is your computer's security. The fact that the MSRT itself isn't working is completely unimportant, the deeper question we're all asking is; Why?
So assuming we're now on the same page, the point I'm trying to make (and I believe others as well) is that you're concentrating on the symptom rather than the problem. We've all tried to provide differing solutions to either find the true failure or simply bypass this and repair your system using known processes.
Any of these methods might be valid, but simply repeating the same failed attempts to use a tool that's for whatever reason malfunctioning is a complete waste of time.
So by no means am I personally telling you not to try and get it working, since something's obviously not right with that's causing it to fail. I'm simply saying that you are wasting your time making repeated attempts to fi this from the standpoint of the file itself, since we've been unable to find anything that confirms this is where the problem lies. In fact, we know that's not true since every log entry you've shown us so far indicates the problem only occurs when executing it manually, with the automatic process working perfectly each time it's been logged.
So why you keep banging your head against the same wall is what I (we?) are really asking and so why you won't try some of the more comprehensive, system wide repair methods provided by others earlier in this thread? I can't say whether any of these will work up to but not including a complete operating system reinstall, but I can assure you they have a better chance of working more quickly than continuing to play with the executable file itself, downloaded by hand or not.
By this point the question of why is typically of less concern than how to return to normal operation quickly and easily.
Rob