It will be an exact copy. That means the wrong AppData files will be copied as well.
Suggest you pick one of the three choices I mentioned earlier. The easiest option is to create a new local admin account and delete your original user account. This prevents the AppData migration issues during setup.
Edit:
Additionally, the log shows some 0x00000002 errors, which can occur it the disk/file system is corrupted.
Run:
- chkdsk c: /r
Restart Windows and let chkdsk start the scan.
Open Event Viewer and see the results of the last Chkdsk operation and post the info here. See How to check chkdsk scan result after reboot