Antonio, I understand the frustration which I deal with here every day and gets to me, too.
I'm just curious about what you mean by Disk0 being created by the Version upgrade being run from .exe. Was that one of the data drives that you're missing?
Did you previously have Windows 10 on Disk1 next to the EFI System Partition which is where it should be? Or is E a data partition with 1.2 gb of data on it? Did it ever have Windows on it to explain why it's next to an EFI System partition?
As to the two external drives the disk listings at top of the Disk Manager seem to think they have quite a bit of data on them. I just don't know what happened to them. I do see threads here regularly with people saying they lost data off of unrelated drives when Updates were run, I also try everything possible to try to find it or explain what happened, but at this point I cannot say for sure or even guess.
I'm sorry. The best I can advise at this point is to double up on your backups to avoid it happening again, but I know that doesn't help much now. I am going to bring it up in our MVP channel and at a Product Group meeting we're having later this month, to ask if others are seeing this, too. If so we'll start pressing it, and I won't forget this.