You're right, this does NOT seem device specific - I'm experiencing a similar problem on a different system!
Upon the bootup, my system opens the COM port for 'actual' serial communication with other MPU-based devices.
However the system sometimes pops up a COM port error message, and I see this 'microsoft serial ballpoint' from my device manager - I did tried to disable it, but it comes back.
What I found so far is, if I force to transmit '0000' to the COM port while it is booting up, the Windows will detect this 'microsoft serial ballpoint'. Haven't found any way to prevent this though..
I also tried playing with 'EWF' options which did not help.
Have you discevered any fixes that works from your experience?